Commanding a Separatist invasion force more than one-million strong, the cunning Pors Tonith lays siege to the planet Praesitlyn, home of the communications center that is key to the Republic's survival. Already outnumbered and outgunned, when confronted with an enemy ultimatum that could lead to the massacre of innocents, the Jedi may also be out of options¿unless Anakin Skywalker can strike a crucial balance between the wisdom born of the Force and the instincts of a born warrior.

On the strategic planet Ansion, a powerful faction is on the verge of joining the secessionist movement. At the Chancellor's request, the Jedi Council sends Jedi Knights Obi-Wan Kenobi and Luminara Unduli, along with their Padawans, Anakin Skywalker and Barriss Offee, to stabilize the planet's population. To succeed, the Jedi will have to fulfill near-impossible tasks, befriend wary strangers, and influence two great armies - stalked all the while by an enemy sworn to see the mission fail.

The Clone Wars have exploded across the galaxy as Republic forces and Separatists struggle to gain the upper hand. But while the Jedi generals work tirelessly to defeat Count Dooku and his rebels, Supreme Chancellor Palpatine is hatching his own dark plans. The Separatists have launched a sneak attack on Coruscant. Obi-Wan Kenobi, wounded in battle, insists that Anakin Skywalker and his rookie Padawan, Ahsoka, leave on a risky mission against General Grievous.

. The Separatist Alliance, with ruthlessness and treachery, is beating the Republic to every strategic target. But after a costly clash with General Grievous for the planet Kothlis, Anakin has a mission that will focus his anxious mind. Alongside Obi-Wan Kenobi, he is posing as a long-lost native of Lanteeb, an impoverished world on the Outer Rim. This seemingly unimportant planet has drawn the interest of the Sepsand Anakin and Obi-Wan soon discover the disturbing reason: A scientist enslaved by General Lok Durd is drawing on Lanteebs one natural resource for a devastating bioweapon.

Tatooine - a harsh desert world where farmers toil in the heat of two suns while trying to protect themselves and their loved ones from the marauding Tusken Raiders. A backwater planet on the edge of civilized space. And an unlikely place to find a Jedi Master in hiding, or an orphaned infant boy on whose tiny shoulders rests the future of a galaxy.

Jedi were never intended to be soldiers. But now they have no choice. Mace Windu - Jedi Master, skilled diplomat, devastating fighter - must journey alone to the most treacherous jungle planet in the galaxy and into his own heritage. He will leave behind the Republic he serves, the civilization he believes in, everything but his passion for peace and his devotion to his former Padawan. And he will learn the terrible price that must be paid when keepers of the peace are forced to make war.

The war that erupted in Star Wars: Episode II Attack of the Clones is nearing its boiling point. The Separatist forces continue their assault on the Republic as the diabolical triumvirate of Count Dooku, General Grievous, and their Master, Darth Sidious, fine-tune their strategy for conquest. Capturing Trade Federation Viceroy and Separatist Councilmember Nute Gunray is the mission that brings Jedi Knights Obi-Wan Kenobi and Anakin Skywalker, with a squad of clones in tow, to Neimoidia.

It's kill or be killed in the space penitentiary that houses the galaxy’s worst criminals, where convicts face off in gladiatorial combat while an underworld gambling empire reaps the profits of the illicit blood sport. But the newest contender in this savage arena, as demonic to behold as he is deadly to challenge, is fighting for more than just survival. His do-or-die mission, for the dark masters he serves, is to capture the ultimate weapon: an object that will enable the Sith to conquer the galaxy.

Torrent Company's Captain Rex agrees to temporarily relieve Anakin Skywalker of Ahsoka, his ubiquitous and insatiably curious Padawan, by bringing her along on a routine three-day shakedown cruise aboard Captain Gilad Pellaeon's newly refitted assault ship. But the training run becomes an active and dangerous rescue mission when Republic undercover Agent Hallena Devis goes missing in the middle of a Separatist invasion. 

The jungle planet of Haruun Kal, homeworld of the legendary Jedi Master Mace Windu, has become a battleground in the increasing hostilities between the Republic and the renegade Separatist movement. The Jedi Council has sent Depa Billaba - Mace’s former Padawan and fellow Council member - to Haruun Kal to train the local tribesmen as a guerrilla resistance force. But now the Separatists have pulled back, and Depa has not returned. 

Hoping to stem the growing tide of unrest, Chancellor Valorum convenes an emergency trade summit on the planet Eriadu. A group of Jedi Knights is sent to protect the delegates from possible terrorist attack, but what should have been a simple peacekeeping assignment turns out to be a mission into the heart of a political firestorm. For shadowy forces are at work, pulling the strings in a bid for power that could leave the Republic reeling. And the chancellor is only the most visible victim.

As civil war between the Republic and the Separatists rages across the galaxy, nowhere is the fighting more fierce than on the swamp world of Drongar, where a beleaguered mobile hospital unit wages a never-ending war of its own.... 

The threatened enemy offensive begins as the Separatists employ legions of droids into their attack. Even with reinforcements, the flesh and blood of the Republic forces are just no match for the battle droids' durasteel. Nowhere is this point more painfully clear than in the steaming Jasserak jungle, where the doctors and nurses of a small med unit face an impossible situation. As the dead and wounded start to pile up, surgeons Jos Vandar and Kornell "Uli" Divini know that time is running out.

Across the galaxy, the Clone Wars are raging. The Separatists, led by Count Dooku, the onetime Jedi and now secret Sith Lord, continue to press forward, and more and more worlds are either falling, or seceding and joining the cause. Under the leadership of Supreme Chancellor Palpatine, the Republic heroically battles on, championed by its huge army of cloned soldiers and their Jedi generals. Anakin Skywalker, believed by some to be the prophesied “Chosen One” destined to bring balance to the Force, is now a Jedi Knight under the tutelage of his Jedi Master, Obi-Wan Kenobi.

The overthrow of the Republic is complete. The Separatist forces have been smashed, the Jedi Council nearly decimated, and the rest of the Order all but destroyed. Now absolute power rests in the iron fist of Darth Sidious - the cunning Sith Lord better known as the former Senator, now Emperor, Palpatine. But more remains to be done.